Basic Information
Locus ID:
nbis-gene-15945
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00014.1 | 1097882 | 1105797 | - | nbis-gene-15945 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.55 | 120,023.32 Da | 45.44 | 83.16 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 386 | 424 | 1.2E-4 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 827 | 865 | 6.3E-9 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 767 | 865 | 1.89E-25 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 387 | 646 | 2.1E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 675 | 737 | 2.2E-5 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 744 | 822 | 2.6E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 826 | 875 | 1.4E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 385 | 674 | 1.0E-67 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 473 | 496 | 5.2 | IPR003591 |
| SMART | SM00220 | serkin_6 | 764 | 959 | 3.1E-4 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 546 | 569 | 19.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 679 | 1108 | 9.813956 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 770 | 792 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 839 | 851 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 32 | 58 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 16 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 224 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G24650.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004981977.1 | receptor protein kinase TMK1 [Setaria italica] | 0 |
| Q9FYK0 | Receptor-like kinase TMK2 OS=Arabidopsis thaliana OX=3702 GN=TMK2 PE=1 SV=1 | 0 | |
| TrEMBL | K4A5E7 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101782673 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology