Basic Information
Locus ID:
nbis-gene-15782
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CPK30
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00014.1 | 269968 | 272088 | + | nbis-gene-15782 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.87 | 67,470.99 Da | 41.67 | 74.26 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 510 | 572 | 5.54674E-20 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 98 | 352 | 4.07497E-118 | - |
| Pfam | PF13499 | EF-hand domain pair | 437 | 498 | 4.4E-11 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 509 | 572 | 2.8E-14 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 99 | 353 | 9.6E-68 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 415 | 584 | 3.73E-44 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 95 | 363 | 8.9E-83 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 380 | 573 | 7.0E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 101 | 184 | 7.3E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 185 | 365 | 2.2E-57 | - |
| SMART | SM00054 | efh_1 | 474 | 502 | 0.11 | IPR002048 |
| SMART | SM00220 | serkin_6 | 99 | 356 | 6.8E-90 | IPR000719 |
| SMART | SM00054 | efh_1 | 510 | 538 | 0.021 | IPR002048 |
| SMART | SM00054 | efh_1 | 546 | 574 | 3.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 438 | 466 | 8.1E-6 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 434 | 469 | 15.154999 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 99 | 356 | 45.714317 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 470 | 505 | 10.022245 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 506 | 541 | 12.923368 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 542 | 577 | 14.5413 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 447 | 459 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 555 | 567 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 483 | 495 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 519 | 531 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 105 | 128 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 77 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_034570363.1 | calcium-dependent protein kinase 9-like [Setaria viridis] | 0 |
| Q6AVI8 | Calcium-dependent protein kinase 9 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK9 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0A9DH90 | Calcium-dependent protein kinase 30 OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology