HalophFGD

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Basic Information
Locus ID: nbis-gene-1573
Species & Taxonomic ID: Zoysia japonica & 309978
Genome Assembly: GCA_040438285.1
Description: NAC domain
Maps and Mapping Data
Chromosome Start End Strand ID
Zjn_sc00002.1 938449 943790 - nbis-gene-1573
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.46 20,081.63 Da 46.07 76.36 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd14358 UBA_NAC_euk 147 183 6.18682E-18 -
Pfam PF01849 NAC domain 45 100 2.4E-23 IPR002715
Pfam PF19026 HYPK UBA domain 144 183 6.3E-12 IPR044034
Gene3D G3DSA:2.20.70.30 - 51 104 1.4E-31 IPR038187
Gene3D G3DSA:1.10.8.10 - 144 182 5.4E-19 -
SMART SM01407 NAC_2 45 101 9.8E-27 IPR002715
PIRSF PIRSF015901 NAC_alpha 4 184 3.7E-59 IPR016641
ProSiteProfiles PS51151 NAC A/B domain profile. 42 107 17.578865 IPR002715
MobiDBLite mobidb-lite consensus disorder prediction 1 51 - -
MobiDBLite mobidb-lite consensus disorder prediction 13 28 - -
Coils Coil Coil 3 23 - -
Gene Ontology
Cellular Component:
GO:0005854 (nascent polypeptide-associated complex)
KEGG Pathway
KO Term:
K03626 (nascent polypeptide-associated complex subunit alpha)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G12390.1 Nascent polypeptide-associated complex (NAC), alpha subunit family protein. 0
RefSeq XP_004984363.1 nascent polypeptide-associated complex subunit alpha-like protein 1 [Setaria italica] 0
Swiss-Prot Q9LHG9 Nascent polypeptide-associated complex subunit alpha-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At3g12390 PE=1 SV=1 0
TrEMBL A0A5J9WGF0 NAC-A/B domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_06602 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network

No network data available for this species.

Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 5 jg15786, jg2111, jg31413, jg33198, jg33199
Aizoaceae Mesembryanthemum crystallinum 2 gene_16315, gene_9856
Amaranthaceae Atriplex hortensis 4 Ah006727, Ah006728, Ah006816, Ah018468
Amaranthaceae Beta vulgaris 2 BVRB_2g023790, BVRB_3g050890
Amaranthaceae Salicornia bigelovii 4 Sbi_jg14942, Sbi_jg16061, Sbi_jg55748, Sbi_jg56921
Amaranthaceae Salicornia europaea 2 Seu_jg24723, Seu_jg26271
Amaranthaceae Suaeda aralocaspica 2 GOSA_00008005, GOSA_00017871
Amaranthaceae Suaeda glauca 4 Sgl06276, Sgl25174, Sgl30356, Sgl71185
Amaranthaceae Chenopodium album 7 gene:ENSEOMG00000002428, gene:ENSEOMG00000004217 ...
gene:ENSEOMG00000011279, gene:ENSEOMG00000027913, gene:ENSEOMG00000032671, gene:ENSEOMG00000040128, gene:ENSEOMG00000043864
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.3AG0006420, CQ.Regalona.r1.3BG0006490 ...
CQ.Regalona.r1.4AG0014330, CQ.Regalona.r1.4BG0013290
Anacardiaceae Pistacia vera 2 pistato.v30074660, pistato.v30262970
Apiaceae Apium graveolens 8 Ag10G02209, Ag2G01559, Ag2G01560, Ag2G02139, Ag3G01459 ...
Ag4G02601, Ag8G01921, AgUnG01497
Arecaceae Cocos nucifera 5 COCNU_04G008840, COCNU_07G008360, COCNU_10G006290 ...
COCNU_12G004800, COCNU_16G002790
Arecaceae Phoenix dactylifera 6 gene-LOC103702764, gene-LOC103705105, gene-LOC103711709 ...
gene-LOC103720377, gene-LOC103722855, gene-LOC120106215
Asparagaceae Asparagus officinalis 1 AsparagusV1_08.2938.V1.1
Asteraceae Flaveria trinervia 5 Ftri11G20294, Ftri12G31126, Ftri18G06375, Ftri1G06931 ...
Ftri3G12877
Brassicaceae Arabidopsis thaliana 5 AT1G33040.1, AT3G12390.1, AT3G49470.1, AT4G10480.1 ...
AT5G13850.1
Brassicaceae Eutrema salsugineum 4 Thhalv10010701m.g.v1.0, Thhalv10014708m.g.v1.0 ...
Thhalv10021544m.g.v1.0, Thhalv10029431m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp3g10580.v2.2, Sp5g12610.v2.2, Sp6g06980.v2.2 ...
Sp6g30150.v2.2
Brassicaceae Brassica nigra 8 BniB01g030360.2N, BniB01g052600.2N, BniB02g048730.2N ...
BniB05g058460.2N, BniB07g025880.2N, BniB07g056370.2N, BniB08g035870.2N, BniB08g052190.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq05G0948, Ceq09G1691
Casuarinaceae Casuarina glauca 2 Cgl05G0949, Cgl09G1827
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno03g13600, gene.Cymno03g13640
Dunaliellaceae Dunaliella salina 2 Dusal.0297s00004.v1.0, Dusal.3768s00001.v1.0
Hydrocharitaceae Thalassia testudinum 1 gene.Thate05g00980
Malvaceae Hibiscus hamabo Siebold & Zucc. 3 nbisL1-mrna-11651, nbisL1-mrna-3705, nbisL1-mrna-8174
Nitrariaceae Nitraria sibirica 2 evm.TU.LG02.2064, evm.TU.LG05.1299
Plantaginaceae Plantago ovata 4 Pov_00000622, Pov_00011115, Pov_00014760, Pov_00041220
Plumbaginaceae Limonium bicolor 3 Lb1G04037, Lb1G07138, Lb4G21852
Poaceae Echinochloa crus-galli 12 AH01.3630, AH01.5114, AH02.4466, AH05.2691, BH01.3976 ...
BH01.5096, BH01.5250, BH02.4516, BH05.2786, CH01.4246, CH02.4566, CH05.2873
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_3AG0231530, gene-QOZ80_3AG0248310 ...
gene-QOZ80_3BG0279930, gene-QOZ80_3BG0296360, gene-QOZ80_5AG0375570, gene-QOZ80_5BG0422910
Poaceae Hordeum vulgare 4 HORVU.MOREX.r3.1HG0059770.1, HORVU.MOREX.r3.2HG0109280.1 ...
HORVU.MOREX.r3.3HG0316960.1, HORVU.MOREX.r3.4HG0412610.1
Poaceae Lolium multiflorum 7 gene-QYE76_013786, gene-QYE76_057816, gene-QYE76_057817 ...
gene-QYE76_057851, gene-QYE76_057853, gene-QYE76_067844, gene-QYE76_071299
Poaceae Oryza coarctata 7 Oco01G029580, Oco02G030760, Oco05G001280, Oco06G001240 ...
Oco09G008060, Oco10G008280, Oco10G008290
Poaceae Oryza sativa 4 LOC_Os01g71230.1, LOC_Os03g02960.1, LOC_Os05g31000.1 ...
LOC_Os07g22450.1
Poaceae Paspalum vaginatum 3 gene-BS78_01G354300, gene-BS78_01G501700 ...
gene-BS78_06G105500
Poaceae Puccinellia tenuiflora 3 Pt_Chr0102732, Pt_Chr0505287, Pt_Chr0600761
Poaceae Sporobolus alterniflorus 11 Chr01G021700, Chr01G034680, Chr01G038620, Chr01G038910 ...
Chr04G011400, Chr07G010800, Chr12G000750, Chr12G004950, Chr12G016600, Chr18G007540, Chr22G009950
Poaceae Thinopyrum elongatum 9 Tel1E01G393700, Tel3E01G761000, Tel3E01G761100 ...
Tel3E01G762000, Tel3E01G762100, Tel3E01G762200, Tel3E01G762700, Tel4E01G264000, Tel4E01G569300
Poaceae Triticum dicoccoides 11 gene_TRIDC1AG035350, gene_TRIDC1BG040820 ...
gene_TRIDC3AG066780, gene_TRIDC3BG075590, gene_TRIDC3BG075600, gene_TRIDC3BG075660, gene_TRIDC3BG075710, gene_TRIDC4AG019470, gene_TRIDC4BG029440, gene_TRIDC4BG058480, gene_TRIDC5AG073570
Poaceae Triticum aestivum 23 TraesCS1B02G248000.1, TraesCS1D02G236500.1 ...
TraesCS3A02G474200.1, TraesCS3A02G474500.1, TraesCS3A02G474600.1, TraesCS3A02G474800.1, TraesCS3A02G474900.1, TraesCS3B02G517400.1, TraesCS3B02G517500.1, TraesCS3B02G518000.1, TraesCS3B02G518200.1, TraesCS3B02G518300.1, TraesCS3B02G518400.1, TraesCS3D02G470500.1, TraesCS3D02G470600.2, TraesCS4A02G138000.1, TraesCS4B02G154200.1, TraesCS4B02G347400.1, TraesCS4D02G164400.1, TraesCS4D02G342400.1, TraesCS5A02G516100.1, TraesCSU02G140000.1, TraesCSU02G140100.1
Poaceae Zea mays 4 Zm00001eb016960_P002, Zm00001eb175220_P001 ...
Zm00001eb394670_P001, Zm00001eb403780_P001
Poaceae Zoysia japonica 4 nbis-gene-1573, nbis-gene-3113, nbis-gene-38748 ...
nbis-gene-38794
Poaceae Zoysia macrostachya 5 Zma_g1205, Zma_g2211, Zma_g26741, Zma_g28111, Zma_g28130
Portulacaceae Portulaca oleracea 7 evm.TU.LG02.1398, evm.TU.LG06.1404, evm.TU.LG09.564 ...
evm.TU.LG11.735, evm.TU.LG18.1339, evm.TU.LG20.548, evm.TU.LG20.549
Posidoniaceae Posidonia oceanica 2 gene.Posoc01g09640, gene.Posoc02g33410
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_1_RagTag.687, evm.TU.Scaffold_7_RagTag.1578 ...
evm.TU.Scaffold_8_RagTag.228, evm.TU.Scaffold_9_RagTag.227
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-10088, nbisL1-mrna-19890, nbisL1-mrna-21947 ...
nbisL1-mrna-7414
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-19386, nbisL1-mrna-7491, nbisL1-mrna-8537
Rhizophoraceae Ceriops zippeliana 4 nbisL1-mrna-13511, nbisL1-mrna-17855, nbisL1-mrna-18596 ...
nbisL1-mrna-18598
Rhizophoraceae Kandelia candel 3 evm.TU.utg000002l.126, evm.TU.utg000003l.665 ...
evm.TU.utg000018l.847
Rhizophoraceae Kandelia obovata 2 Maker00002902, Maker00009642
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-13177, nbisL1-mrna-3159, nbisL1-mrna-6777 ...
nbisL1-mrna-8364
Rhizophoraceae Rhizophora mangle 4 nbisL1-mrna-11377, nbisL1-mrna-12268, nbisL1-mrna-12569 ...
nbisL1-mrna-809
Salicaceae Populus euphratica 4 populus_peu04186, populus_peu10766, populus_peu27933 ...
populus_peu29359
Solanaceae Lycium barbarum 4 gene-LOC132607322, gene-LOC132607595, gene-LOC132620198 ...
gene-LOC132632192
Solanaceae Solanum chilense 2 SOLCI005229000, SOLCI005762800
Solanaceae Solanum pennellii 3 gene-LOC107002589, gene-LOC107002812, gene-LOC107015078
Tamaricaceae Reaumuria soongarica 4 STRG.24488_chr08_-, gene_17937, gene_3056, gene_5027
Tamaricaceae Tamarix chinensis 3 TC05G2442, TC05G2443, TC06G2738
Zosteraceae Zostera marina 1 Zosma04g20750.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.