Basic Information
Locus ID:
nbis-gene-15618
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 4414062 | 4418273 | - | nbis-gene-15618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.62 | 57,794.52 Da | 50.31 | 78.55 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00293 | USP_Like | 52 | 172 | 3.19951E-10 | - |
| Pfam | PF00069 | Protein kinase domain | 323 | 397 | 4.8E-12 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 51 | 173 | 1.0E-4 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 322 | 464 | 6.15E-21 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 316 | 401 | 8.5E-20 | - |
| Gene3D | G3DSA:3.40.50.12370 | - | 35 | 176 | 5.4E-6 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 402 | 478 | 1.8E-6 | - |
| SMART | SM00219 | tyrkin_6 | 98 | 462 | 0.0015 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 216 | 539 | 10.803336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 354 | 366 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 301 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 226 | 245 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 26 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 51 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G77280.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_025795224.1 | uncharacterized protein LOC112875557 [Panicum hallii] | 0 |
| B5X4Z9 | Protein kinase STUNTED OS=Arabidopsis thaliana OX=3702 GN=STU PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UBX7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_30291 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_03.2862.V1.1 |
| Poaceae | Echinochloa crus-galli | 3 | AH01.522, BH01.211, CH01.54 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_3AG0208960, gene-QOZ80_3BG0254090 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0531390.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_060288, gene-QYE76_060318 |
| Poaceae | Oryza coarctata | 2 | Oco05G028500, Oco06G029540 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g62340.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G016700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0106193 |
| Poaceae | Sporobolus alterniflorus | 5 | Chr01G000760, Chr04G032270, Chr07G031320, Chr12G032230 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G807200 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG052760, gene_TRIDC5BG077700 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G351900.1, TraesCS5B02G521500.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb063970_P001, Zm00001eb211040_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-15618, nbis-gene-16707, nbis-gene-56167 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2405, Zma_g83 |