halophFGD

Basic Information

Locus ID: nbis-gene-15512

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00013.1	4049275	4053683	+	nbis-gene-15512

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.82	18,771.12 Da	50.95	72.52	-0.69

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	20	114	2.0E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	20	116	1.96E-15	IPR011009
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	13	144	1.6E-24	-
ProSiteProfiles	PS50011	Protein kinase domain profile.	1	118	8.428824	IPR000719
MobiDBLite	mobidb-lite	consensus disorder prediction	156	171	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	121	171	-	-

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G02290.1	Protein kinase superfamily protein. Encodes a candidate protein kinase NAK that is similar to the oncogenes met and abl.
RefSeq	XP_039829336.1	receptor-like cytoplasmic kinase 176 [Panicum virgatum]
Swiss-Prot	Q65XV8	Receptor-like cytoplasmic kinase 176 OS=Oryza sativa subsp. japonica OX=39947 GN=RLCK176 PE=1 SV=1
TrEMBL	A0A0A9G6U7	Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Zea mays	1	Zm00001eb121360_P001
Poaceae	Zoysia japonica	1	nbis-gene-15512
Rhizophoraceae	Kandelia candel	1	add.evm.TU.utg000013l.138
Rhizophoraceae	Kandelia obovata	1	Maker00004357