Basic Information
Locus ID:
nbis-gene-15449
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 3823290 | 3827904 | - | nbis-gene-15449 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.31 | 55,065.81 Da | 45.84 | 51.46 | -1.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 358 | 440 | 5.5E-16 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 456 | 487 | 8.6E-8 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 358 | 440 | 2.7E-23 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 159 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 217 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 312 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 142 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 346 | 412 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 60 | - | - |
| Coils | Coil | Coil | 392 | 421 | - | - |
| Coils | Coil | Coil | 362 | 389 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_004981310.1 | uncharacterized protein LOC101753781 [Setaria italica] | 0 |
| TrEMBL | A0A5J9WAS9 | PAPA-1 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03887 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology