Basic Information
Locus ID:
nbis-gene-15433
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 3734265 | 3738122 | + | nbis-gene-15433 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 42,599.77 Da | 38.53 | 74.67 | -0.60 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 282 | 344 | 3.03595E-17 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 281 | 344 | 1.1E-13 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 60 | 216 | 1.3E-40 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 253 | 357 | 2.46E-27 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 59 | 216 | 2.02E-46 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 146 | 254 | 2.5E-19 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 273 | 343 | 1.8E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 63 | 145 | 3.2E-28 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 255 | 272 | 1.8E-26 | - |
| SMART | SM00054 | efh_1 | 246 | 274 | 2.6 | IPR002048 |
| SMART | SM00054 | efh_1 | 318 | 346 | 6.9E-6 | IPR002048 |
| SMART | SM00220 | serkin_6 | 60 | 340 | 1.3E-27 | IPR000719 |
| SMART | SM00054 | efh_1 | 282 | 310 | 4.7E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 60 | 350 | 27.947878 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 314 | 349 | 13.481276 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 278 | 313 | 13.843916 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 291 | 303 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 66 | 89 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 327 | 339 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 255 | 267 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 180 | 192 | - | IPR008271 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57530.1 | calcium-dependent protein kinase 32. Calcium-dependent Protein Kinase. ABA signaling component that regulates the ABA-responsive gene expression via ABF4. AtCPK32 has autophosphorylation activity and can phosphorylate ABF4 in vitro | 0 |
| RefSeq | XP_004981335.1 | calcium-dependent protein kinase 8 [Setaria italica] | 0 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6ESK5 | Calcium-dependent protein kinase 8 OS=Zea mays OX=4577 GN=CPK8_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 3 | Ag10G00154, Ag5G00634, AgUnG00261 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-15433, nbis-gene-16538 |