Basic Information
Locus ID:
nbis-gene-15030
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
IAA16
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 2112709 | 2114856 | - | nbis-gene-15030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.61 | 25,272.56 Da | 45.69 | 64.43 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 10 | 226 | 1.7E-75 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 116 | 216 | 1.77E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 120 | 229 | 2.4E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 125 | 217 | 25.610352 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 31 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 53 | 69 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_039828626.1 | auxin-responsive protein IAA13-like [Panicum virgatum] | 0 |
| A2XLV9 | Auxin-responsive protein IAA13 OS=Oryza sativa subsp. indica OX=39946 GN=IAA13 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WCP3 | Auxin-responsive protein OS=Eragrostis curvula OX=38414 GN=EJB05_04567 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology