Basic Information
Locus ID:
nbis-gene-150
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00001.1 | 604286 | 606505 | - | nbis-gene-150 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.90 | 44,624.94 Da | 40.55 | 93.36 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 100 | 350 | 2.8E-33 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 74 | 352 | 4.05E-62 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 265 | 362 | 1.5E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 58 | 173 | 1.1E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 174 | 264 | 3.9E-25 | - |
| SMART | SM00220 | serkin_6 | 97 | 323 | 1.6E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 369 | 26.520344 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 125 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 219 | 231 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_006658945.3 | putative receptor-like protein kinase At4g00960 [Oryza brachyantha] | 0 |
| Q9LDQ3 | Cysteine-rich receptor-like protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CRK34 PE=3 SV=3 | 0 | |
| TrEMBL | A0A835AZE0 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_045728 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.4000, BH03.4328, BH03.4330, CH07.183 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0580800, gene-QOZ80_7BG0611960 |
| Poaceae | Oryza coarctata | 1 | Oco13G015250 |
| Poaceae | Oryza sativa | 1 | LOC_Os07g47230.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G383200 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G000630, Chr27G016880 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-150 |