Basic Information
Locus ID:
nbis-gene-14934
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 1678661 | 1686217 | + | nbis-gene-14934 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 76,738.15 Da | 58.06 | 86.48 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 224 | 258 | 8.5E-10 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 222 | 276 | 5.63E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 222 | 260 | 5.6E-11 | - |
| SMART | SM00256 | fbox_2 | 224 | 265 | 5.6E-6 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 218 | 276 | 9.02057 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 75 | 122 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 627 | 651 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 93 | 107 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_025797558.1 | uncharacterized protein LOC112877464 [Panicum hallii] | 0 |
| TrEMBL | A0A5J9WAA0 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_04750 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 1 | COCNU_08G000350 |
| Poaceae | Echinochloa crus-galli | 2 | AH01.744, CH01.903 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_3BG0263140 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.4HG0339180.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_005203, gene-QYE76_027619, gene-QYE76_062197 |
| Poaceae | Oryza coarctata | 2 | Oco05G022400, Oco06G023290 |
| Poaceae | Oryza sativa | 1 | LOC_Os03g51760.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_01G095900 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0203958 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G006380, Chr05G003980, Chr05G008140, Chr06G010230 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel4E01G098800, Tel5E01G124400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC4AG040110, gene_TRIDC4BG009030 |
| Poaceae | Triticum aestivum | 3 | TraesCS4A02G256400.1.cds1, TraesCS4B02G058300.1.cds1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb055960_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14934, nbis-gene-16019 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g2891, Zma_g573 |