Basic Information
Locus ID:
nbis-gene-14760
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00013.1 | 775569 | 781872 | - | nbis-gene-14760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.70 | 45,008.68 Da | 42.06 | 71.19 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 102 | 193 | 6.8E-18 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 91 | 2.93E-6 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 99 | 248 | 6.97E-37 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 40 | 93 | 1.4E-6 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 94 | 267 | 7.1E-46 | - |
| SMART | SM00220 | serkin_6 | 69 | 247 | 3.9E-4 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 252 | 16.683081 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 130 | 142 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 298 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 314 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 322 | 410 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10290.1 | leucine-rich repeat transmembrane protein kinase family protein. | 0 |
| RefSeq | XP_021307586.1 | probable LRR receptor-like serine/threonine-protein kinase At5g10290 [Sorghum bicolor] | 0 |
| Q6K4T4 | LRR receptor kinase SERK2 OS=Oryza sativa subsp. japonica OX=39947 GN=SERK4 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0A9PJS5 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg17656 |
| Brassicaceae | Brassica nigra | 1 | BniB02g051630.2N |
| Poaceae | Zoysia japonica | 1 | nbis-gene-14760 |