Basic Information
Locus ID:
nbis-gene-14457
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 4080459 | 4081658 | - | nbis-gene-14457 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 41,985.87 Da | 47.78 | 104.84 | 0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 70 | 5.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 125 | 185 | 9.8E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 371 | 8.5E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 217 | 375 | 3.5E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 30 | 216 | 1.4E-37 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_006654388.2 | LRR receptor-like serine/threonine-protein kinase ERL2 [Oryza brachyantha] | 0 |
| TrEMBL | A0A0A9CU75 | LRRNT_2 domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology