Basic Information
Locus ID:
nbis-gene-14375
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 3687361 | 3688991 | + | nbis-gene-14375 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 37,079.19 Da | 32.09 | 65.94 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 192 | 318 | 1.67169E-44 | IPR033734 |
| CDD | cd09612 | Jacalin | 29 | 131 | 9.33529E-31 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 189 | 318 | 4.7E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 22 | 131 | 1.5E-17 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 175 | 318 | 3.27E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 39 | 130 | 8.77E-23 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 172 | 318 | 1.5E-50 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 58 | 131 | 2.0E-26 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 12 | 132 | 2.4E-7 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 189 | 319 | 3.6E-39 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 178 | 319 | 48.385231 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 1 | 132 | 27.572788 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_020394419.1 | uncharacterized protein LOC100272821 isoform X1 [Zea mays] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A811RWN6 | Jacalin-related lectin 3 OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS57392 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology