Basic Information
Locus ID:
nbis-gene-14260
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 3068061 | 3072505 | - | nbis-gene-14260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.56 | 75,182.47 Da | 76.22 | 58.59 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 532 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 442 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 599 | 620 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 53 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 146 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 470 | 484 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G08670.1 | 0 | |
| RefSeq | XP_039800527.1 | flocculation protein FLO11 [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0U929 | Sialidase OS=Panicum virgatum OX=38727 GN=PVAP13_3NG079652 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 3 | jg14679, jg14681, jg3149 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_14602 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah031572 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_7g156700 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg2117, Sbi_jg34393 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg2651 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00005848 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl12791, Sgl74724 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000009449, gene:ENSEOMG00000034192 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.4AG0019760, CQ.Regalona.r1.7AG0023280 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30269440 |
| Apiaceae | Apium graveolens | 1 | Ag10G00998 |
| Arecaceae | Cocos nucifera | 3 | COCNU_04G004770, COCNU_04G012300, COCNU_16G005590 |
| Arecaceae | Phoenix dactylifera | 3 | gene-LOC103702157, gene-LOC103716682, gene-LOC103722179 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3310.V1.1 |
| Asteraceae | Flaveria trinervia | 2 | Ftri10G11159, Ftri9G01505 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G08670.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10020404m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g07110.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g055870.2N, BniB07g024600.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq08G0868 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl08G0886 |
| Cymodoceaceae | Cymodocea nodosa | 2 | gene.Cymno04g11750, gene.Cymno05g12820 |
| Hydrocharitaceae | Thalassia testudinum | 4 | gene.Thate01g10680, gene.Thate01g29720, gene.Thate02g15750 ... |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 3 | nbisL1-mrna-12526, nbisL1-mrna-12527, nbisL1-mrna-5362 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG01.844 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00002584 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G25636 |
| Poaceae | Echinochloa crus-galli | 7 | AH02.3684, AH05.2013, BH02.3264, BH05.2152, CH02.3970 ... |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_1BG0087910, gene-QOZ80_5AG0369200 ... |
| Poaceae | Oryza coarctata | 4 | Oco01G023350, Oco02G024110, Oco09G012350, Oco10G012470 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G317200, gene-BS78_09G182700 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0504553, Pt_Chr0504561, Pt_Chr0601795, Pt_Chr0601805 ... |
| Poaceae | Sporobolus alterniflorus | 7 | Chr01G018370, Chr02G006300, Chr03G018820, Chr05G027080 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G488800 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC1AG044810, gene_TRIDC3AG049330 ... |
| Poaceae | Zea mays | 4 | Zm00001eb149660_P003, Zm00001eb290760_P001 ... |
| Poaceae | Zoysia japonica | 3 | nbis-gene-11587, nbis-gene-14260, nbis-gene-25366 |
| Poaceae | Zoysia macrostachya | 3 | Zma_g26992, Zma_g28450, Zma_g8884 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG16.1532, evm.TU.LG26.131 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc01g27220 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.60379.3, evm.TU.60380.3 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-5700 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-9483 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-3599 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000016l.320 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00016839 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-4882 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-13866 |
| Salicaceae | Populus euphratica | 2 | populus_peu11532, populus_peu25238 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132631179 |
| Solanaceae | Solanum chilense | 1 | SOLCI000092400 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107031771 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.1624_chr01_+ |
| Tamaricaceae | Tamarix chinensis | 2 | TC02G2349, TC07G0954 |
| Zosteraceae | Zostera marina | 1 | Zosma01g29160.v3.1 |