Basic Information
Locus ID:
nbis-gene-14208
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 2822734 | 2826068 | - | nbis-gene-14208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.75 | 56,549.00 Da | 54.23 | 89.62 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 268 | 391 | 4.4E-15 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 204 | 478 | 1.29E-31 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 195 | 308 | 8.3E-16 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 309 | 392 | 9.6E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 393 | 484 | 2.1E-11 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 226 | 482 | 13.672539 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 123 | 137 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_034588005.1 | protein MALE DISCOVERER 1-like isoform X2 [Setaria viridis] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U895 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_35996 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | AH05.2078, BH05.2211, CH05.2292 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0369800, gene-QOZ80_5BG0417380 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0071920.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_014129 |
| Poaceae | Oryza coarctata | 1 | Oco10G011970 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g39410.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_09G173600 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0504591, Pt_Chr0504607 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr01G018700 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G479000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC1AG043980, gene_TRIDC1BG049810 |
| Poaceae | Triticum aestivum | 3 | TraesCS1A02G296300.2, TraesCS1B02G305200.2 ... |
| Poaceae | Zea mays | 1 | Zm00001eb290130_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-14208, nbis-gene-24193 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g27025, Zma_g28416 |