Basic Information
Locus ID:
nbis-gene-14147
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 2568749 | 2574434 | - | nbis-gene-14147 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.41 | 15,248.39 Da | 46.63 | 87.63 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 12 | 74 | 1.3E-18 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 6 | 76 | 5.51E-24 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 4 | 112 | 2.8E-24 | IPR016135 |
| SMART | SM00212 | ubc_7 | 10 | 137 | 8.4E-5 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 7 | 139 | 22.463284 | IPR000608 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G59300.1 | ubiquitin carrier protein 7. ubiquitin conjugating enzyme E2 | 0 |
| RefSeq | XP_004961845.1 | ubiquitin-conjugating enzyme E2 7 [Setaria italica] | 0 |
| Q42540 | Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana OX=3702 GN=UBC7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0S1L5 | UBC core domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_5NG583700 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbis-gene-14147.