Basic Information
Locus ID:
nbis-gene-13861
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
leucine-rich repeat protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 1388976 | 1391140 | - | nbis-gene-13861 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 22,617.97 Da | 46.64 | 71.15 | -0.67 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12819 | Malectin-like domain | 1 | 85 | 1.3E-13 | IPR024788 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 108 | 198 | 2.2E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 120 | 200 | 4.9E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 138 | 200 | 9.884626 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 144 | 166 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 121 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G51850.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_004961439.1 | putative leucine-rich repeat receptor-like protein kinase At2g19210 [Setaria italica] | 0 |
| C0LGG3 | Probable LRR receptor-like serine/threonine-protein kinase At1g51820 OS=Arabidopsis thaliana OX=3702 GN=At1g51820 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5VLM0 | Receptor-like protein kinase OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012945 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_6AG0532990 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_057047 |
| Poaceae | Oryza coarctata | 1 | Oco21G010000 |
| Poaceae | Oryza sativa | 2 | LOC_Os09g17890.1, LOC_Os09g22300.1 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G552100 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-13861 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g10600, gene.Posoc08g12640 |
| Rhizophoraceae | Rhizophora mangle | 6 | nbisL1-mrna-21362, nbisL1-mrna-24214, nbisL1-mrna-24215 ... |
| Zosteraceae | Zostera marina | 1 | Zosma02g14880.v3.1 |