Basic Information
Locus ID:
nbis-gene-13837
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 1286812 | 1289971 | + | nbis-gene-13837 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.47 | 27,428.22 Da | 46.60 | 87.31 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14335 | UBA_SnRK1_plant | 121 | 161 | 1.06615E-17 | - |
| Pfam | PF00069 | Protein kinase domain | 14 | 120 | 6.1E-25 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 120 | 9.38E-32 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 120 | 3.2E-35 | - |
| Gene3D | G3DSA:1.10.8.10 | - | 121 | 162 | 6.7E-8 | - |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 120 | 160 | 13.775846 | IPR015940 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 14 | 238 | 19.01519 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G01090.1 | SNF1 kinase homolog 10. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It can also interact with PRL1 DWD-containing protein. Based on in vitro degradation assays and cul4cs and prl1 mutants, there is evidence that AKIN10 is degraded in a proteasome-dependent manner, and that this depends on a CUL4-PRL1 E3 ligase | 0 |
| RefSeq | XP_039800122.1 | serine/threonine protein kinase OSK1 [Panicum virgatum] | 0 |
| Q852Q2 | Serine/threonine protein kinase OSK1 OS=Oryza sativa subsp. japonica OX=39947 GN=OSK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0UC20 | non-specific serine/threonine protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_3NG258094 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah005482 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl47994, Sgl53349, Sgl58611 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0005760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.1023.V1.1, AsparagusV1_01.2635.V1.1 ... |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0683_0010.v2.2 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011914 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0320830.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G016290 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG078850 |
| Poaceae | Zea mays | 1 | Zm00001eb107770_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13837, nbis-gene-269, nbis-gene-36809 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4878 |
| Salicaceae | Populus euphratica | 1 | populus_peu09382 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114076934 |