Basic Information
Locus ID:
nbis-gene-13596
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Mitogen-activated protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00012.1 | 406016 | 414321 | - | nbis-gene-13596 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.77 | 81,477.63 Da | 62.00 | 70.15 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00086 | homeodomain | 549 | 605 | 6.70183E-15 | IPR001356 |
| Pfam | PF00069 | Protein kinase domain | 240 | 327 | 2.2E-12 | IPR000719 |
| Pfam | PF00046 | Homeodomain | 549 | 603 | 2.9E-13 | IPR001356 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 235 | 325 | 1.12E-18 | IPR011009 |
| SUPERFAMILY | SSF46689 | Homeodomain-like | 547 | 604 | 4.11E-17 | IPR009057 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 322 | 375 | 1.0E-9 | - |
| Gene3D | G3DSA:1.10.10.60 | - | 546 | 612 | 1.2E-15 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 226 | 321 | 1.0E-27 | - |
| SMART | SM00220 | serkin_6 | 240 | 377 | 3.5E-5 | IPR000719 |
| SMART | SM00389 | HOX_1 | 547 | 608 | 1.3E-13 | IPR001356 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 240 | 594 | 10.492389 | IPR000719 |
| ProSiteProfiles | PS50071 | 'Homeobox' domain profile. | 544 | 604 | 15.272592 | IPR001356 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 246 | 270 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 364 | 386 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 157 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 66 | - | - |
| Coils | Coil | Coil | 599 | 640 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18040.5 | - | 0 |
| RefSeq | XP_025809527.1 | mitogen-activated protein kinase 17-like [Panicum hallii] | 0 |
| Q6L5F7 | Mitogen-activated protein kinase 17 OS=Oryza sativa subsp. japonica OX=39947 GN=MPK17 PE=2 SV=2 | 0 | |
| TrEMBL | A0A835C8V9 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_026401 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Asparagaceae | Asparagus officinalis | 7 | AsparagusV1_02.1391.V1.1, AsparagusV1_04.2346.V1.1 ... |
| Brassicaceae | Brassica nigra | 1 | BniB07g010910.2N |
| Poaceae | Zea mays | 1 | Zm00001eb025520_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13596, nbis-gene-24744, nbis-gene-40726 |