Basic Information
Locus ID:
nbis-gene-13492
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Seed dormancy control
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00011.1 | 4853589 | 4854629 | + | nbis-gene-13492 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.13 | 37,672.40 Da | 60.26 | 80.58 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14144 | Seed dormancy control | 150 | 221 | 3.0E-20 | IPR025422 |
| ProSiteProfiles | PS51806 | DOG1 domain profile. | 131 | 339 | 25.397169 | IPR025422 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 22 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 92 | 126 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G09950.1 | RESPONSE TO ABA AND SALT 1. | 0 |
| RefSeq | XP_004967541.2 | protein DOG1-like 4 [Setaria italica] | 0 |
| O04515 | Protein RESPONSE TO ABA AND SALT 1 OS=Arabidopsis thaliana OX=3702 GN=RAS1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9UCP1 | DOG1 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_30858 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology