Basic Information
Locus ID:
nbis-gene-13277
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00011.1 | 3421535 | 3428990 | - | nbis-gene-13277 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 60,058.00 Da | 49.38 | 80.77 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 117 | 267 | 5.7E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 98 | 267 | 5.8E-54 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 199 | 7.1E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 265 | 7.1E-63 | - |
| SMART | SM00220 | serkin_6 | 116 | 422 | 2.7E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 374 | 32.089142 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 235 | 247 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 145 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 499 | 544 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 399 | 441 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33080.2 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 0 |
| RefSeq | XP_025815051.1 | serine/threonine-protein kinase tricorner-like [Panicum hallii] | 0 |
| Q54Y26 | Probable serine/threonine-protein kinase ndrA OS=Dictyostelium discoideum OX=44689 GN=ndrA PE=3 SV=1 | 0 | |
| TrEMBL | A0A835E5Y6 | Serine/threonine-protein kinase tricorner OS=Digitaria exilis OX=1010633 GN=HU200_055817 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbis-gene-13277.