Basic Information
Locus ID:
nbis-gene-13185
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
transcriptional co-repressor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00011.1 | 2932583 | 2935791 | + | nbis-gene-13185 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.15 | 22,017.52 Da | 48.54 | 87.88 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 159 | 194 | 2.0E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 120 | 144 | 0.0096 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 89 | 194 | 1.03E-17 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 87 | 201 | 1.7E-21 | IPR015943 |
| SMART | SM00320 | WD40_4 | 108 | 153 | 0.0013 | IPR001680 |
| SMART | SM00320 | WD40_4 | 155 | 194 | 7.4E-6 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 162 | 203 | 9.019239 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 162 | 194 | 10.441614 | IPR001680 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G32551.1 | LisH dimerisation motif;WD40/YVTN repeat-like-containing domain. LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors. | 0 |
| RefSeq | XP_020088772.1 | transcriptional corepressor LEUNIG-like [Ananas comosus] | 0 |
| Q9FUY2 | Transcriptional corepressor LEUNIG OS=Arabidopsis thaliana OX=3702 GN=LUG PE=1 SV=2 | 0 | |
| TrEMBL | A0A0D9UXG2 | LisH domain-containing protein OS=Leersia perrieri OX=77586 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology