Basic Information
Locus ID:
nbis-gene-12697
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00011.1 | 659226 | 666733 | - | nbis-gene-12697 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.21 | 62,882.94 Da | 56.79 | 60.26 | -0.81 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 236 | 370 | 4.42026E-39 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 236 | 370 | 2.7E-23 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 224 | 370 | 8.9E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 211 | 370 | 2.6E-47 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 236 | 371 | 1.9E-30 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 225 | 371 | 42.42944 | IPR001229 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 459 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 111 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 179 | 195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 515 | 535 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 126 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 213 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 451 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 480 | 514 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G73040.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_039848720.1 | jacalin-related lectin 19-like [Panicum virgatum] | 0 |
| Q9SSM3 | Jacalin-related lectin 19 OS=Arabidopsis thaliana OX=3702 GN=JAL19 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9SWJ0 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_51180 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology