Basic Information
Locus ID:
nbis-gene-12324
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Phosphatidylethanolamine-binding protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00010.1 | 2864672 | 2871278 | - | nbis-gene-12324 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.20 | 62,165.44 Da | 45.85 | 73.11 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00866 | PEBP_euk | 25 | 151 | 1.09719E-34 | IPR035810 |
| Pfam | PF02042 | RWP-RK domain | 487 | 534 | 9.9E-20 | IPR003035 |
| Pfam | PF01161 | Phosphatidylethanolamine-binding protein | 49 | 148 | 1.9E-7 | IPR008914 |
| SUPERFAMILY | SSF49777 | PEBP-like | 5 | 158 | 8.37E-38 | IPR036610 |
| Gene3D | G3DSA:3.90.280.10 | - | 1 | 92 | 1.7E-25 | IPR036610 |
| Gene3D | G3DSA:3.90.280.10 | - | 93 | 156 | 1.7E-13 | IPR036610 |
| ProSiteProfiles | PS51519 | RWP-RK domain profile. | 469 | 554 | 15.880451 | IPR003035 |
| ProSitePatterns | PS01220 | Phosphatidylethanolamine-binding protein family signature. | 67 | 89 | - | IPR001858 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 443 | 475 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65480.1 | PEBP (phosphatidylethanolamine-binding protein) family protein. FT, together with LFY, promotes flowering and is antagonistic with its homologous gene, TERMINAL FLOWER1 (TFL1). FT is expressed in leaves and is induced by long day treatment. Either the FT mRNA or protein is translocated to the shoot apex where it induces its own expression. Recent data suggests that FT protein acts as a long-range signal. FT is a target of CO and acts upstream of SOC1. | 0 |
| RefSeq | XP_034587729.1 | protein FLOWERING LOCUS T-like [Setaria viridis] | 0 |
| Q9SXZ2 | Protein FLOWERING LOCUS T OS=Arabidopsis thaliana OX=3702 GN=FT PE=1 SV=2 | 0 | |
| TrEMBL | A0A5J9SY52 | RWP-RK domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_50477 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology