Basic Information
Locus ID:
nbis-gene-12080
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00010.1 | 823034 | 826420 | - | nbis-gene-12080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 46,240.71 Da | 52.63 | 87.29 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 149 | 226 | 8.7E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 23 | 112 | 5.9E-10 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 289 | 396 | 1.83E-12 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 124 | 230 | 3.8E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 19 | 114 | 3.2E-11 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 280 | 396 | 9.8E-18 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 122 | 230 | 16.561268 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 8 | 115 | 13.42924 | IPR002902 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03230.3 | - | 0 |
| RefSeq | XP_044442743.1 | cysteine-rich receptor-like protein kinase 6 [Triticum aestivum] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9V7N0 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_23135 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology