Basic Information
Locus ID:
nbis-gene-11767
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 4368932 | 4371411 | + | nbis-gene-11767 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.46 | 46,024.48 Da | 38.26 | 73.08 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 175 | 311 | 1.06251E-40 | IPR033734 |
| CDD | cd09612 | Jacalin | 17 | 146 | 8.70006E-41 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 17 | 146 | 2.0E-28 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 172 | 311 | 1.5E-25 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 2 | 146 | 6.28E-40 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 159 | 311 | 1.19E-37 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 155 | 311 | 4.9E-49 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 2 | 146 | 1.5E-46 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 172 | 312 | 2.4E-34 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 17 | 148 | 6.0E-37 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 161 | 312 | 47.588001 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 6 | 148 | 47.456692 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.2 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_021312154.1 | jacalin-related lectin 3 [Sorghum bicolor] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VHD9 | Jacalin-type lectin domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16773 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology