Basic Information
Locus ID:
nbis-gene-11744
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the NPH3 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 4267716 | 4270262 | + | nbis-gene-11744 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.09 | 71,250.74 Da | 45.96 | 88.19 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 42 | 146 | 6.1E-7 | IPR000210 |
| Pfam | PF03000 | NPH3 family | 230 | 516 | 1.0E-95 | IPR027356 |
| SUPERFAMILY | SSF54695 | POZ domain | 37 | 132 | 7.69E-16 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 35 | 168 | 2.7E-11 | IPR011333 |
| SMART | SM00225 | BTB_4 | 43 | 145 | 0.0037 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 43 | 115 | 10.840413 | IPR000210 |
| ProSiteProfiles | PS51649 | NPH3 domain profile. | 230 | 540 | 94.295631 | IPR027356 |
| Coils | Coil | Coil | 597 | 617 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03250.1 | Phototropic-responsive NPH3 family protein. | 0 |
| RefSeq | XP_004970185.1 | BTB/POZ domain-containing protein At5g03250 [Setaria italica] | 0 |
| Q9LYW0 | BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9VH97 | NPH3 domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_16747 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology