Basic Information
Locus ID:
nbis-gene-11728
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
divergent subfamily of APPLE domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 4209013 | 4210838 | - | nbis-gene-11728 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 27,381.57 Da | 49.05 | 81.38 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 76 | 142 | 1.1E-14 | IPR000719 |
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 204 | 247 | 1.8E-8 | IPR021820 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 68 | 210 | 3.24E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 67 | 143 | 3.8E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 215 | 1.0E-5 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 247 | 15.015268 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 107 | 119 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 218 | 247 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11530.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 34. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021313097.1 | receptor-like serine/threonine-protein kinase SD1-8 [Sorghum bicolor] | 0 |
| Q9LDQ3 | Cysteine-rich receptor-like protein kinase 34 OS=Arabidopsis thaliana OX=3702 GN=CRK34 PE=3 SV=3 | 0 | |
| TrEMBL | A0A5J9VHL7 | Non-specific serine/threonine protein kinase (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_16739 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg2136 |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003627, Ah017478, Ah017734, Ah031514 |
| Amaranthaceae | Suaeda aralocaspica | 2 | GOSA_00011440, GOSA_00012107 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000033066 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30065570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G1043300 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG082020, gene_TRIDC3BG079770 |
| Poaceae | Zoysia japonica | 4 | nbis-gene-11728, nbis-gene-20192, nbis-gene-22941 ... |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-26558, nbisL1-mrna-29828 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-12602, nbisL1-mrna-24800 |
| Salicaceae | Populus euphratica | 1 | populus_peu27963 |