Basic Information
Locus ID:
nbis-gene-11622
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the cysteine synthase cystathionine beta- synthase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 3759028 | 3761398 | + | nbis-gene-11622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 25,015.54 Da | 49.99 | 95.98 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 141 | 227 | 1.57E-13 | IPR036052 |
| SUPERFAMILY | SSF53686 | Tryptophan synthase beta subunit-like PLP-dependent enzymes | 63 | 142 | 8.64E-15 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 160 | 227 | 2.4E-20 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 84 | 112 | 1.1E-23 | IPR036052 |
| Gene3D | G3DSA:3.40.50.1100 | - | 113 | 147 | 1.1E-23 | IPR036052 |
| ProSitePatterns | PS00901 | Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. | 108 | 126 | - | IPR001216 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00270 (Cysteine and methionine metabolism)
map00270 (Cysteine and methionine metabolism)
ko00920 (Sulfur metabolism)
map00920 (Sulfur metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G03630.1 | cysteine synthase 26. Encodes a protein that possesses S-sulfocysteine synthase activity and lacks O-acetylserien(thiol)lyase activity. | 0 |
| RefSeq | NP_001311202.1 | uncharacterized protein LOC103651084 [Zea mays] | 0 |
| P31300 | Cysteine synthase, chloroplastic/chromoplastic OS=Capsicum annuum OX=4072 PE=2 SV=1 | 0 | |
| TrEMBL | A0A3L6SRH9 | Putative S-sulfocysteine synthase, chloroplastic isoform X2 OS=Panicum miliaceum OX=4540 GN=C2845_PM07G25620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology