Basic Information
Locus ID:
nbis-gene-11508
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
CPK13
Description:
EF-hand domain pair
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 3319729 | 3325981 | - | nbis-gene-11508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.91 | 57,555.05 Da | 43.76 | 87.08 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 68 | 325 | 6.46444E-136 | - |
| Pfam | PF13499 | EF-hand domain pair | 372 | 432 | 5.2E-10 | IPR002048 |
| Pfam | PF13405 | EF-hand domain | 446 | 471 | 1.2E-5 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 68 | 326 | 1.6E-74 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 357 | 493 | 1.55E-35 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 333 | 9.98E-85 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 154 | 334 | 5.1E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 70 | 153 | 2.5E-24 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 335 | 508 | 6.9E-45 | - |
| SMART | SM00054 | efh_1 | 409 | 437 | 1.5 | IPR002048 |
| SMART | SM00220 | serkin_6 | 68 | 326 | 6.2E-97 | IPR000719 |
| SMART | SM00054 | efh_1 | 373 | 401 | 4.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 445 | 473 | 8.9E-4 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 441 | 476 | 13.927603 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 68 | 326 | 47.46693 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 369 | 404 | 16.18713 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 74 | 97 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 188 | 200 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 454 | 466 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 382 | 394 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 45 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.2 | - | 0 |
| RefSeq | XP_004970457.1 | calcium-dependent protein kinase 3 [Setaria italica] | 0 |
| Q8LPZ7 | Calcium-dependent protein kinase 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A835BVW5 | Calcium-dependent protein kinase 30 OS=Digitaria exilis OX=1010633 GN=HU200_026014 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology