Basic Information
Locus ID:
nbis-gene-11470
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
AFC1
Description:
Serine/Threonine protein kinases, catalytic domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00009.1 | 3168064 | 3170418 | + | nbis-gene-11470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.24 | 29,696.38 Da | 74.83 | 62.11 | -0.71 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 197 | 250 | 5.05E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 188 | 255 | 3.2E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 196 | 256 | 10.322781 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 158 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 121 | 138 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53570.3 | FUS3-complementing gene 1. a member of a CDC2-related kinase subfamily, the LAMMER kinases. activates STE12-dependent functions in yeast. | 0 |
| RefSeq | XP_006658054.1 | serine/threonine-protein kinase AFC1 [Oryza brachyantha] | 0 |
| P51566 | Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana OX=3702 GN=AFC1 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6SSH9 | Serine/threonine-protein kinase AFC1 OS=Panicum miliaceum OX=4540 GN=C2845_PM07G27900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
No orthogroup found for nbis-gene-11470.