halophFGD

Basic Information

Locus ID: nbis-gene-11370

Species & Taxonomic ID: Zoysia japonica & 309978

Genome Assembly: GCA_040438285.1

Short Name: COI1

Description: Coronatine-insensitive protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
Zjn_sc00009.1	2742453	2743121	-	nbis-gene-11370

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
6.70	24,673.30 Da	46.78	100.63	0.10

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF52047	RNI-like	11	155	7.26E-13	-
Gene3D	G3DSA:3.80.10.10	Ribonuclease Inhibitor	1	221	2.4E-65	IPR032675

KEGG Pathway

KO Term:

K13463 (coronatine-insensitive protein 1)

Pathway:

ko04075 (Plant hormone signal transduction) map04075 (Plant hormone signal transduction)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G39940.1	RNI-like superfamily protein. Encodes a protein containing Leu-rich repeats and a degenerate F-box motif. Associates with AtCUL1, AtRbx1, and the Skp1-like proteins ASK1 and ASK2 to assemble SCF COI1 ubiquitin-ligase complexes in planta. A single amino acid substitution in the F-box motif of COI1 abolishes the formation of the SCF(COI1) complexes and results in loss of the JA response. Required for wound- and jasmonates-induced transcriptional regulation.
RefSeq	NP_001392372.1	coronatine-insensitive protein homolog 1a [Oryza sativa Japonica Group]
Swiss-Prot	A2WX30	Coronatine-insensitive protein homolog 1a OS=Oryza sativa subsp. indica OX=39946 GN=COI1A PE=3 SV=1
TrEMBL	A0A0E0FVW2	Coronatine insensitive 1 OS=Oryza nivara OX=4536 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

No network data available for this species.

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg14306, jg2613, jg34153, jg9998
Aizoaceae	Mesembryanthemum crystallinum	1	gene_16984
Amaranthaceae	Atriplex hortensis	5	Ah005981, Ah014677, Ah024835, Ah024836, Ah035260
Amaranthaceae	Beta vulgaris	1	BVRB_2g024250
Amaranthaceae	Salicornia bigelovii	2	Sbi_jg21373, Sbi_jg22478
Amaranthaceae	Salicornia europaea	1	Seu_jg16356
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00007707, GOSA_00016414
Amaranthaceae	Suaeda glauca	5	Sgl42329, Sgl42367, Sgl47107, Sgl62916, Sgl67524
Amaranthaceae	Chenopodium album	5	gene:ENSEOMG00000012395, gene:ENSEOMG00000018665 ... gene:ENSEOMG00000020307, gene:ENSEOMG00000046331, gene:ENSEOMG00000051645
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.1BG0019410, CQ.Regalona.r1.2AG0021110 ... CQ.Regalona.r1.8AG0019140, CQ.Regalona.r1.8BG0023240
Anacardiaceae	Pistacia vera	1	pistato.v30176510
Apiaceae	Apium graveolens	4	Ag10G01260, Ag5G01402, Ag8G00467, AgUnG00255
Arecaceae	Cocos nucifera	3	COCNU_12G008680, COCNU_16G008650, scaffold010560G000010
Arecaceae	Phoenix dactylifera	3	gene-LOC103695487, gene-LOC103723578, gene-LOC103723671
Asparagaceae	Asparagus officinalis	2	AsparagusV1_02.22.V1.1, AsparagusV1_08.3568.V1.1
Asteraceae	Flaveria trinervia	6	Ftri17G02002, Ftri17G20419, Ftri17G29930, Ftri6G04037 ... Ftri8G27511, Ftri9G14331
Brassicaceae	Arabidopsis thaliana	1	AT2G39940.1
Brassicaceae	Eutrema salsugineum	1	Thhalv10016416m.g.v1.0
Brassicaceae	Schrenkiella parvula	1	Sp4g22250.v2.2
Brassicaceae	Brassica nigra	3	BniB01g005360.2N, BniB06g004890.2N, BniB08g025670.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq02G0177, Ceq08G0061
Casuarinaceae	Casuarina glauca	1	Cgl02G0197
Cymodoceaceae	Cymodocea nodosa	2	gene.Cymno15g07800, gene.Cymno18g00130
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate02g02570, gene.Thate02g17440, gene.Thate08g13340
Malvaceae	Hibiscus hamabo Siebold & Zucc.	2	nbisL1-mrna-10932, nbisL1-mrna-3965
Nitrariaceae	Nitraria sibirica	1	evm.TU.LG02.1832
Plantaginaceae	Plantago ovata	2	Pov_00011824, Pov_00040453
Plumbaginaceae	Limonium bicolor	3	Lb1G06540, Lb7G33801, Lb7G33804
Poaceae	Echinochloa crus-galli	9	AH01.4243, AH02.3911, AH05.2230, BH01.4549, BH02.3933 ... BH05.2349, BH07.4241, CH01.4850, CH05.2432
Poaceae	Eleusine coracana subsp. coracana	6	gene-QOZ80_1AG0040250, gene-QOZ80_1BG0090300 ... gene-QOZ80_3AG0242200, gene-QOZ80_3BG0285930, gene-QOZ80_5AG0371160, gene-QOZ80_5BG0418670
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.1HG0074250.1, HORVU.MOREX.r3.3HG0301480.1 ... HORVU.MOREX.r3.4HG0389550.1
Poaceae	Lolium multiflorum	3	gene-QYE76_014411, gene-QYE76_056438, gene-QYE76_069104
Poaceae	Oryza coarctata	7	Oco01G025160, Oco02G026070, Oco05G009030, Oco06G009390 ... Oco09G011060, Oco10G011020, Oco22G006350
Poaceae	Oryza sativa	3	LOC_Os01g63420.1, LOC_Os03g15880.4, LOC_Os05g37690.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G406900, gene-BS78_03G339600 ... gene-BS78_09G162900
Poaceae	Puccinellia tenuiflora	7	Pt_Chr0102204, Pt_Chr0102225, Pt_Chr0202640, Pt_Chr0300043 ... Pt_Chr0300045, Pt_Chr0504817, Pt_Chr0601497
Poaceae	Sporobolus alterniflorus	11	Chr01G019550, Chr01G030580, Chr02G004400, Chr04G007330 ... Chr05G028980, Chr07G004300, Chr08G021900, Chr12G009050, Chr12G018690, Chr18G010740, Chr22G006920
Poaceae	Thinopyrum elongatum	3	Tel1E01G454000, Tel3E01G585500, Tel4E01G374600
Poaceae	Triticum dicoccoides	6	gene_TRIDC1AG041510, gene_TRIDC1BG047280 ... gene_TRIDC3AG052860, gene_TRIDC3BG059420, gene_TRIDC4AG012380, gene_TRIDC4BG038040
Poaceae	Triticum aestivum	9	TraesCS1A02G279100.1, TraesCS1B02G288100.1 ... TraesCS1D02G278400.1, TraesCS3A02G367500.1, TraesCS3B02G399200.1, TraesCS3D02G360400.2, TraesCS4A02G091200.1, TraesCS4B02G213500.1, TraesCS4D02G214200.1
Poaceae	Zea mays	6	Zm00001eb011780_P003, Zm00001eb147720_P001 ... Zm00001eb288770_P001, Zm00001eb347860_P001, Zm00001eb367310_P001, Zm00001eb397990_P001
Poaceae	Zoysia japonica	4	nbis-gene-11370, nbis-gene-2147, nbis-gene-24070 ... nbis-gene-31649
Poaceae	Zoysia macrostachya	4	Zma_g11560, Zma_g1570, Zma_g3964, Zma_g9018
Portulacaceae	Portulaca oleracea	6	evm.TU.LG05.192, evm.TU.LG05.977, evm.TU.LG10.1036 ... evm.TU.LG17.1053, evm.TU.LG25.1120, evm.TU.LG25.359
Posidoniaceae	Posidonia oceanica	2	gene.Posoc01g04150, gene.Posoc07g15830
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_11_RagTag.340, evm.TU.Scaffold_4_RagTag.993
Rhizophoraceae	Carallia pectinifolia	2	nbisL1-mrna-14071, nbisL1-mrna-25936
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-15138, nbisL1-mrna-1788
Rhizophoraceae	Ceriops zippeliana	2	nbisL1-mrna-1417, nbisL1-mrna-14227
Rhizophoraceae	Kandelia candel	2	evm.TU.utg000005l.148, evm.TU.utg000008l.640
Rhizophoraceae	Kandelia obovata	2	Maker00000276, Maker00010218
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-2002, nbisL1-mrna-455
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-18875, nbisL1-mrna-9324, nbisL1-mrna-9657
Salicaceae	Populus euphratica	2	populus_peu06512, populus_peu20389
Solanaceae	Lycium barbarum	1	gene-LOC132640389
Solanaceae	Solanum chilense	1	SOLCI003808900
Solanaceae	Solanum pennellii	1	gene-LOC107020531
Tamaricaceae	Reaumuria soongarica	1	STRG.13159_chr07_+
Tamaricaceae	Tamarix chinensis	1	TC08G1010
Zosteraceae	Zostera marina	4	Zosma01g21340.v3.1, Zosma01g23720.v3.1, Zosma06g27780.v3.1 ... Zosma06g28020.v3.1