Basic Information
Locus ID:
nbis-gene-10573
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 4642342 | 4646529 | + | nbis-gene-10573 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.28 | 63,607.87 Da | 37.77 | 80.83 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 57 | 315 | 2.3524E-139 | - |
| CDD | cd15898 | EFh_PI-PLC | 364 | 496 | 1.94335E-15 | - |
| CDD | cd00051 | EFh | 435 | 497 | 8.71489E-17 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 58 | 316 | 9.3E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 434 | 497 | 5.7E-14 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 379 | 426 | 3.6E-6 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 344 | 522 | 1.56E-41 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 56 | 328 | 2.02E-88 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 61 | 143 | 1.9E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 324 | 1.6E-58 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 325 | 499 | 2.2E-49 | - |
| SMART | SM00054 | efh_1 | 471 | 499 | 6.6E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 363 | 391 | 0.022 | IPR002048 |
| SMART | SM00220 | serkin_6 | 58 | 316 | 3.2E-101 | IPR000719 |
| SMART | SM00054 | efh_1 | 435 | 463 | 0.67 | IPR002048 |
| SMART | SM00054 | efh_1 | 399 | 427 | 1.4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 58 | 316 | 49.431557 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 467 | 502 | 14.234451 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 395 | 430 | 8.766953 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 359 | 394 | 12.951263 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 431 | 466 | 11.835447 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 480 | 492 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 178 | 190 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 408 | 420 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 372 | 384 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 444 | 456 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 64 | 87 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 34 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12480.1 | calmodulin-domain protein kinase 7. calmodulin-domain protein kinase CDPK isoform 7 (CPK7) | 0 |
| RefSeq | XP_025802338.1 | calcium-dependent protein kinase 20 [Panicum hallii] | 0 |
| Q84SL0 | Calcium-dependent protein kinase 20 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK20 PE=2 SV=2 | 0 | |
| TrEMBL | A0A3L6QQK2 | Calcium-dependent protein kinase 30 OS=Panicum miliaceum OX=4540 GN=C2845_PM04G29770 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology