Basic Information
Locus ID:
nbis-gene-10262
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 3297647 | 3303887 | - | nbis-gene-10262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.75 | 17,488.06 Da | 45.98 | 90.13 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 4 | 124 | 6.39E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 48 | 146 | 8.5E-16 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 47 | 3.7E-9 | - |
| SMART | SM00220 | serkin_6 | 1 | 103 | 0.0047 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 6 | 30 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18710.1 | Protein kinase superfamily protein. ATSK (shaggy-like kinase) family member that encodes an AtSK protein involved in the cross-talk between auxin and brassinosteroid signaling pathways. BR-INSENSITIVE 2 mutant indicated that the BR-insensitive dwarf phenotype was due to a semidominant mutation in the BIN2. BIN2 is not allelic to BRI1. BIN2-mediated phosphorylation appears to promote BZR1 export from the nucleus. | 0 |
| RefSeq | XP_034589919.1 | shaggy-related protein kinase GSK4 [Setaria viridis] | 0 |
| Q5Z7J0 | Shaggy-related protein kinase GSK4 OS=Oryza sativa subsp. japonica OX=39947 GN=GSK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6LTC2 | non-specific serine/threonine protein kinase OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d037010 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg20647 |
| Apiaceae | Apium graveolens | 1 | Ag11G03458 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103698143 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-10262, nbis-gene-57386 |