Basic Information
Locus ID:
nbis-gene-10208
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Description:
phosphatase 2A 55 kDa regulatory subunit B'
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 3042368 | 3053554 | - | nbis-gene-10208 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.70 | 28,087.39 Da | 45.92 | 82.25 | -0.39 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 41 | 204 | 5.13E-12 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 39 | 213 | 3.8E-8 | IPR015943 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 80 | 108 | 5.7E-14 | IPR000009 |
| PRINTS | PR00600 | Protein phosphatase PP2A 55kDa regulatory subunit signature | 47 | 67 | 5.7E-14 | IPR000009 |
Gene Ontology
Molecular Function:
Cellular Component:
KEGG Pathway
Pathway:
ko03015 (mRNA surveillance pathway)
map03015 (mRNA surveillance pathway)
ko04071 (Sphingolipid signaling pathway)
map04071 (Sphingolipid signaling pathway)
ko04111 (Cell cycle - yeast)
map04111 (Cell cycle - yeast)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04390 (Hippo signaling pathway)
map04390 (Hippo signaling pathway)
ko04391 (Hippo signaling pathway - fly)
map04391 (Hippo signaling pathway - fly)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G17720.2 | Protein phosphatase 2A, regulatory subunit PR55. type 2A protein serine/threonine phosphatase 55 kDa B | 0 |
| RefSeq | XP_025799160.1 | serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform isoform X2 [Panicum hallii] | 0 |
| Q5Z8Z7 | Serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B alpha isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0563300 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9TBE2 | Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B OS=Eragrostis curvula OX=38414 GN=EJB05_41288 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology