Basic Information
Locus ID:
nbis-gene-10076
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
EBF1
Description:
Leucine Rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 2448624 | 2450816 | - | nbis-gene-10076 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.27 | 62,473.04 Da | 43.17 | 105.64 | 0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 55 | 95 | 0.0012 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 164 | 187 | 0.0022 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 218 | 368 | 1.18E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 47 | 90 | 1.44E-5 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 131 | 589 | 6.28E-42 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 120 | 203 | 1.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 204 | 395 | 5.4E-29 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 396 | 592 | 2.3E-33 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 216 | 241 | 4.9 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 428 | 453 | 0.23 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 322 | 347 | 0.022 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 402 | 427 | 4.7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 138 | 163 | 0.036 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 348 | 373 | 590.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 534 | 559 | 370.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 455 | 480 | 3.4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 164 | 189 | 2.5E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 190 | 215 | 1.2 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 482 | 507 | 0.0021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 508 | 532 | 10.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 296 | 321 | 11.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_004965933.1 | EIN3-binding F-box protein 1 [Setaria italica] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9T9M0 | F-box domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_41481 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology