Basic Information
Locus ID:
nbis-gene-10075
Species & Taxonomic ID:
Zoysia japonica & 309978
Genome Assembly:
GCA_040438285.1
Short Name:
SOS2
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| Zjn_sc00008.1 | 2441150 | 2449778 | + | nbis-gene-10075 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.16 | 31,006.29 Da | 35.38 | 84.91 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd12195 | CIPK_C | 155 | 249 | 4.04378E-38 | - |
| Pfam | PF00069 | Protein kinase domain | 57 | 95 | 2.3E-8 | IPR000719 |
| Pfam | PF03822 | NAF domain | 151 | 210 | 1.4E-19 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 94 | 3.66E-20 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 55 | 1.4E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 56 | 94 | 1.1E-9 | - |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 148 | 255 | 3.1E-37 | - |
| SMART | SM00220 | serkin_6 | 14 | 171 | 2.0E-5 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 149 | 173 | 12.242463 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 20 | 43 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35410.1 | Protein kinase superfamily protein. encodes a member of the CBL-interacting protein kinase family, is a regulatory component controlling plant potassium nutrition | 0 |
| RefSeq | XP_002438654.1 | CBL-interacting protein kinase 24 [Sorghum bicolor] | 0 |
| Q69Q47 | CBL-interacting protein kinase 24 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK24 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2S3HIK5 | non-specific serine/threonine protein kinase OS=Panicum hallii OX=206008 GN=PAHAL_4G088500 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology