Basic Information
Locus ID:
jg9476
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 3162982 | 3167706 | + | jg9476 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.41 | 61,141.12 Da | 47.84 | 93.10 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF81383 | F-box domain | 90 | 142 | 1.01E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 235 | 415 | 3.45E-13 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 224 | 447 | 2.7E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 82 | 134 | 1.2E-6 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 91 | 139 | 9.179537 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 90 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02910.2 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_011086586.1 | F-box protein At3g59000-like [Sesamum indicum] | 0 |
| Q9LYZ4 | F-box/LRR-repeat protein At5g02910 OS=Arabidopsis thaliana OX=3702 GN=At5g02910 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9TYL5 | F-box protein At3g59000-like OS=Sesamum indicum OX=4182 GN=LOC105168269 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology