Basic Information
Locus ID:
jg9310
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1776472 | 1779539 | + | jg9310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 35,336.95 Da | 50.73 | 85.26 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 177 | 242 | 3.5E-12 | IPR001245 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 272 | 305 | 6.8E-6 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 153 | 302 | 1.88E-25 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 144 | 243 | 4.6E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 244 | 309 | 3.1E-8 | - |
| SMART | SM00219 | tyrkin_6 | 145 | 310 | 9.6E-5 | IPR020635 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 310 | 8.937648 | IPR000719 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G14000.1 | VH1-interacting kinase. Encodes a protein with similarity to members of the C1 subgroup of MAP kinase kinase kinases. Interacts physically with the receptor kinase BRL2/VH1 and appears to be involved in auxin and brassinosteriod signaling. | 0 |
| RefSeq | XP_017970978.1 | PREDICTED: serine/threonine-protein kinase STY46 [Theobroma cacao] | 0 |
| Q9XI87 | Serine/threonine-protein kinase VIK OS=Arabidopsis thaliana OX=3702 GN=VIK PE=1 SV=1 | 0 | |
| TrEMBL | A0A7J9C6Y8 | Protein kinase domain-containing protein OS=Gossypium gossypioides OX=34282 GN=Gogos_006639 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for jg9310.