Basic Information
Locus ID:
jg9258
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1442258 | 1443121 | - | jg9258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.16 | 32,352.90 Da | 42.41 | 107.42 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 70 | 209 | 1.1E-23 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 70 | 279 | 6.52E-43 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 284 | 6.2E-47 | - |
| SMART | SM00220 | serkin_6 | 9 | 282 | 1.2E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 282 | 22.26601 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 131 | 143 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G69270.1 | receptor-like protein kinase 1. RPK1 is a leucine-rich receptor-like kinase located in the plasma membrane which is upregulated by abscisic acid, dehydration, high salt, low temperature, but not by other plant hormones. RPK1 knock-out and antisense plants show an ABA-insensitive phenotype. RPK1 plays a role in ABA-controlled cell proliferation and is a regulator of the ABA signal transduction pathway. Overexpression of the LRR domain has a dominant negative effect on RPK1. | 0 |
| RefSeq | XP_011101764.2 | LRR receptor-like serine/threonine-protein kinase RPK2 [Sesamum indicum] | 0 |
| Q9ZRF9 | Probable LRR receptor-like serine/threonine-protein kinase RPK1 OS=Arabidopsis thaliana OX=3702 GN=RPK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9US35 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Sesamum indicum OX=4182 GN=LOC105179820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology