Basic Information
Locus ID:
jg9229
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Heat shock protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1237403 | 1243759 | - | jg9229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.88 | 88,998.26 Da | 41.51 | 81.92 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16927 | HATPase_Hsp90-like | 95 | 277 | 1.67326E-90 | - |
| Pfam | PF00183 | Hsp90 protein | 259 | 756 | 1.5E-193 | IPR001404 |
| Pfam | PF02518 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase | 109 | 255 | 1.3E-13 | IPR003594 |
| SUPERFAMILY | SSF55874 | ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 86 | 287 | 2.1E-59 | IPR036890 |
| SUPERFAMILY | SSF54211 | Ribosomal protein S5 domain 2-like | 330 | 588 | 1.59E-90 | IPR020568 |
| SUPERFAMILY | SSF110942 | HSP90 C-terminal domain | 610 | 731 | 6.8E-34 | IPR037196 |
| Gene3D | G3DSA:3.30.565.10 | - | 72 | 302 | 7.9E-83 | IPR036890 |
| Gene3D | G3DSA:3.40.50.11260 | - | 501 | 587 | 7.1E-32 | - |
| Gene3D | G3DSA:1.20.120.790 | - | 588 | 735 | 1.0E-52 | IPR037196 |
| Gene3D | G3DSA:3.30.230.80 | - | 328 | 500 | 1.3E-74 | - |
| SMART | SM00387 | HKATPase_4 | 108 | 256 | 1.9E-6 | IPR003594 |
| PIRSF | PIRSF002583 | HSP90_HTPG | 63 | 774 | 7.6E-235 | IPR001404 |
| ProSitePatterns | PS00298 | Heat shock hsp90 proteins family signature. | 106 | 115 | - | IPR019805 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 107 | 129 | 1.9E-50 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 156 | 173 | 1.9E-50 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 86 | 106 | 1.9E-50 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 203 | 225 | 1.9E-50 | IPR020575 |
| PRINTS | PR00775 | 90kDa heat shock protein signature | 174 | 191 | 1.9E-50 | IPR020575 |
| Hamap | MF_00505 | Chaperone protein HtpG [htpG]. | 76 | 732 | 25.623543 | IPR001404 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 312 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 767 | 782 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 741 | 782 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G04030.1 | Chaperone protein htpG family protein. Encodes a chloroplast-targeted 90-kDa heat shock protein located in the stroma involved in red-light mediated deetiolation response. Mutants are resistant to chlorate, have elongated hypocotyls in light, and affect the expression of NR2, CAB, and RBCS but NOT NR1 and NiR. | 0 |
| RefSeq | XP_011101956.1 | heat shock protein 90-5, chloroplastic-like [Sesamum indicum] | 0 |
| Q9SIF2 | Heat shock protein 90-5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HSP90-5 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9V2F6 | heat shock protein 90-5, chloroplastic-like OS=Sesamum indicum OX=4182 GN=LOC105179995 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology