Basic Information
Locus ID:
jg9211
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Short Name:
NIK2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 1110205 | 1113164 | + | jg9211 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.01 | 68,064.27 Da | 38.58 | 96.10 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 68 | 9.5E-11 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 296 | 561 | 4.0E-43 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 119 | 179 | 1.4E-11 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 565 | 1.27E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 32 | 193 | 2.58E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 206 | 4.9E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 372 | 584 | 4.2E-63 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 265 | 371 | 5.3E-36 | - |
| SMART | SM00220 | serkin_6 | 295 | 545 | 4.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 295 | 545 | 35.580238 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 301 | 323 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 414 | 426 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G25560.1 | NSP-interacting kinase 2. | 0 |
| RefSeq | XP_011070875.1 | protein NSP-INTERACTING KINASE 2-like [Sesamum indicum] | 0 |
| Q8RY65 | Protein NSP-INTERACTING KINASE 2 OS=Arabidopsis thaliana OX=3702 GN=NIK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6I9SLV3 | protein NSP-INTERACTING KINASE 2-like OS=Sesamum indicum OX=4182 GN=LOC105156448 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology