Basic Information
Locus ID:
jg9136
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
ubiquitin protein ligase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr8 | 507913 | 508885 | + | jg9136 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.69 | 7,672.76 Da | 53.29 | 56.21 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G18290.1 | zinc finger protein-related. Encodes BRUTUS (BTS), a putative E3 ligase protein with metal ion binding and DNA binding domains, which negatively regulates the response to iron deficiency. | 0 |
| RefSeq | XP_030497302.1 | zinc finger protein BRUTUS [Cannabis sativa] | 0 |
| Q8LPQ5 | Zinc finger protein BRUTUS OS=Arabidopsis thaliana OX=3702 GN=BTS PE=1 SV=1 | 0 | |
| TrEMBL | A0A2Z7CRJ9 | Zinc finger protein BRUTUS OS=Dorcoceras hygrometricum OX=472368 GN=F511_21686 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg9136 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_5BG0412270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel4E01G247100 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC7AG059190 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G421700.1, TraesCS6D02G075000.2 ... |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132625745 |