Basic Information
Locus ID:
jg8974
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 13175204 | 13177840 | - | jg8974 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.49 | 56,529.97 Da | 63.44 | 56.34 | -1.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 469 | 499 | 3.9E-6 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 367 | 452 | 8.3E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 367 | 452 | 5.1E-31 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 27 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 295 | 324 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 100 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 254 | 288 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 200 | 223 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 66 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 116 | 159 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 417 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 175 | - | - |
| Coils | Coil | Coil | 359 | 393 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_011079546.1 | uncharacterized protein LOC105163038 [Sesamum indicum] | 0 |
| TrEMBL | A0A6I9T668 | uncharacterized protein LOC105163038 OS=Sesamum indicum OX=4182 GN=LOC105163038 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology