halophFGD

Basic Information

Locus ID: jg8930

Species & Taxonomic ID: Avicennia marina & 1381980

Genome Assembly: GCA_013168755.1

Description: leucine-rich repeat receptor-like serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr16	12899744	12899956	+	jg8930

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.89	8,029.07 Da	61.03	79.29	-0.80

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	1	69	8.8E-7	-

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT5G54590.2	Protein kinase superfamily protein.
RefSeq	XP_002282916.1	PREDICTED: calcium/calmodulin-regulated receptor-like kinase 1 [Vitis vinifera]
Swiss-Prot	Q9FIU5	Calcium/calmodulin-regulated receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRLK1 PE=1 SV=1
TrEMBL	A0A438ID89	Calcium/calmodulin-regulated receptor-like kinase 1 OS=Vitis vinifera OX=29760 GN=CRLK1_4 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg19608, jg38334, jg8930