Basic Information
Locus ID:
jg8775
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Homocysteine S-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 11945296 | 11949267 | + | jg8775 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.95 | 37,060.46 Da | 36.02 | 90.30 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 20 | 327 | 1.7E-78 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 15 | 332 | 1.01E-84 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 9 | 327 | 2.6E-103 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 290 | 336 | 1.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 132 | 251 | 430.0 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 11 | 108 | 6.2E-7 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 7 | 329 | 47.46254 | IPR003726 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_012832117.1 | PREDICTED: homocysteine S-methyltransferase 2 isoform X1 [Erythranthe guttata] | 0 |
| Q9M1W4 | Homocysteine S-methyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=HMT-2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A022S1A8 | Hcy-binding domain-containing protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a009479mg PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology