Basic Information
Locus ID:
jg865
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Hippocampus abundant
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 356676 | 360876 | - | jg865 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.88 | 48,006.25 Da | 25.74 | 121.15 | 0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 10 | 420 | 9.20121E-44 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 10 | 382 | 7.9E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 3 | 424 | 8.5E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 2 | 422 | 4.6E-37 | IPR036259 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_011088647.1 | hippocampus abundant transcript 1 protein [Sesamum indicum] | 0 |
| Q96MC6 | Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G9GWA8 | Putative transporter ADD1 (Major facilitator superfamily) OS=Handroanthus impetiginosus OX=429701 GN=CDL12_17930 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology