Basic Information
Locus ID:
jg864
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
F-box LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 349427 | 350810 | + | jg864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.38 | 21,552.70 Da | 58.49 | 92.92 | 0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52047 | RNI-like | 86 | 175 | 8.37E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 63 | 184 | 3.6E-8 | IPR032675 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012836766.1 | PREDICTED: F-box/LRR-repeat protein At3g48880-like [Erythranthe guttata] | 0 |
| TrEMBL | A0A830BQH5 | F-box/LRR-repeat protein at3g48880 OS=Phtheirospermum japonicum OX=374723 GN=PHJA_001052300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg860, jg864 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc06g14640 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132627785 |