Basic Information
Locus ID:
jg8555
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
EF-hand domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 9992002 | 9997189 | - | jg8555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.38 | 59,596.54 Da | 34.12 | 84.09 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 432 | 494 | 9.84764E-20 | IPR002048 |
| CDD | cd05117 | STKc_CAMK | 55 | 312 | 4.93753E-141 | - |
| Pfam | PF13499 | EF-hand domain pair | 361 | 419 | 2.4E-7 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 431 | 494 | 1.3E-15 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 55 | 313 | 4.9E-78 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 342 | 520 | 2.04E-45 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 54 | 322 | 6.47E-87 | IPR011009 |
| Gene3D | G3DSA:1.10.238.10 | - | 322 | 496 | 3.0E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 57 | 140 | 4.8E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 141 | 321 | 3.6E-60 | - |
| SMART | SM00220 | serkin_6 | 55 | 313 | 6.8E-103 | IPR000719 |
| SMART | SM00054 | efh_1 | 360 | 388 | 0.08 | IPR002048 |
| SMART | SM00054 | efh_1 | 396 | 424 | 2.8 | IPR002048 |
| SMART | SM00054 | efh_1 | 468 | 496 | 8.0E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 432 | 460 | 2.3E-4 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 55 | 313 | 50.364403 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 356 | 391 | 11.361225 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 428 | 463 | 14.736568 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 464 | 499 | 14.178661 | IPR002048 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 175 | 187 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 441 | 453 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 405 | 417 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 477 | 489 | - | IPR018247 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 61 | 84 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19450.1 | calcium-dependent protein kinase 19. calcium-dependent protein kinase (CDPK19) mRNA, complete | 0 |
| RefSeq | XP_051118710.1 | calcium-dependent protein kinase 8-like [Andrographis paniculata] | 0 |
| Q42438 | Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CPK8 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G9GF31 | Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily OS=Handroanthus impetiginosus OX=429701 GN=CDL12_23677 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology