Basic Information
Locus ID:
jg8518
Species & Taxonomic ID:
Avicennia marina & 1381980
Genome Assembly:
GCA_013168755.1
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr16 | 9591985 | 9592431 | - | jg8518 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 15,776.44 Da | 61.53 | 54.12 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 78 | 148 | 2.4E-12 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 148 | 1.09E-17 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 148 | 8.6E-21 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 78 | 148 | 12.965838 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 84 | 107 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 37 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12180.1 | calcium-dependent protein kinase 17. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_011080420.1 | calcium-dependent protein kinase 34 [Sesamum indicum] | 0 |
| Q9FMP5 | Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana OX=3702 GN=CPK17 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6I9T7Z7 | calcium-dependent protein kinase 34 OS=Sesamum indicum OX=4182 GN=LOC105163676 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg8518 |
| Salicaceae | Populus euphratica | 1 | populus_peu36024 |